Insertion junction: CLIP2.049901_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049901
Chromosome:chromosome 9
Location:1122898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401550 (1 of 140) IPR002048 - EF-hand domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCACCCCCAACGTCTCACCCCCCACCTCTCACCCCCCTGTGCAGGCAC
Internal bar code:CAATACGGTCTTTAATTGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:145
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GACACGCAATGACACCCAAC
Suggested primer 2:TGTATCATCAGTGGAGGCGC