Insertion junction: CLIP2.049903_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049903
Chromosome:chromosome 7
Location:542718
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316200 (1 of 726) IPR011009 - Protein kinase-like domain CDS
Cre07.g800770 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAAAAGAAATTAGTGACATAGAAGCGCAGATAGTCCGCGTGACGCCCC
Internal bar code:TGGTAGCGAAAAGTCCTCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1114
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCATATCCCTGGGCCATC
Suggested primer 2:CCCCGCCGTTTCAAATTGTT