Insertion junction: CLIP2.049903_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049903
Chromosome:chromosome 7
Location:542922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316200 (1 of 726) IPR011009 - Protein kinase-like domain CDS
Cre07.g800770 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACACACAGCAAAGTTCCCAGAGCTCCCCGCATACCGCGCGCTCCGAG
Internal bar code:TGGTAGCGAAAAGTCCTCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1725
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCGCCGTTTCAAATTGTT
Suggested primer 2:GAGCATATCCCTGGGCCATC