Insertion junction: CLIP2.049909_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049909
Chromosome:chromosome 16
Location:4894823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686950 CTF18 DNA damage repair and chromosome cohesion protein; (1 of 1) K11269 - chromosome transmission fidelity protein 18 (CTF18, CHL12) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACTGGGATGAAGCCAGGATGCCAGGAAGCCACAGGGCCGGCTGTTTG
Internal bar code:AGTCGGGACCTTGACTCTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:829
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGGTATGTGAGGAGGAG
Suggested primer 2:CACACCTTGGCTGTGAAACG