Insertion junction: CLIP2.049924_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049924
Chromosome:chromosome 6
Location:2407367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268650 FAP279 (1 of 8) PF14580 - Leucine-rich repeat (LRR_9); Flagellar Associated Protein 279 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCAGCCCCGGGGCCGAGCACTGAAGAGGGGCTGCTAAGCAAACGAAC
Internal bar code:ATTGTGACTCTGACGCGTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:343
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCCGTGCATCATAGAGA
Suggested primer 2:GTTCGTGTTCCCTCCACCAT