Insertion junction: CLIP2.049925_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049925
Chromosome:chromosome 11
Location:1466367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g469375 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACGCGCGTCGCCACCTGCCATGGCGCGAGCAACAGAAGACGCAACGGC
Internal bar code:CAAACTAGCACATGTAACGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4376
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACTCTCAGCAACAGGTC
Suggested primer 2:AGCAGCTGAGGCATGACTG