Insertion junction: CLIP2.049929_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049929
Chromosome:chromosome 11
Location:3067115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g474850 PUS17 (1 of 2) 5.4.99.29 - 23S rRNA pseudouridine(746) synthase / 23S RNA Psi(746) synthase; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTGCCGGCCTACTGAAGGAGTTAGTGGGGCCCACTCGAATCCATGTA
Internal bar code:AATTTTCTTCTAATATACGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4672
LEAP-Seq percent confirming:98.8235
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCGGAGTCACAACCCAG
Suggested primer 2:GCCTGAAAACGAACCCACAC