Insertion junction: CLIP2.049936_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049936
Chromosome:chromosome 3
Location:4444606
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175500 (1 of 2) K05770 - benzodiazapine receptor (BZRP) CDS
Cre03.g175550 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGCCGGTGCACCGGCAATGAACCGCCGGGCCCGATGCATCAATGCAT
Internal bar code:GTGGACTATTTGAATATACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2451
LEAP-Seq percent confirming:89.1304
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGAGCCGGGAGATTGAGA
Suggested primer 2:GGCCAGGGAACGAAGATGAA