Insertion junction: CLIP2.049938_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049938
Chromosome:chromosome 11
Location:1895625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467785 (1 of 3) PTHR10625:SF102 - HISTONE DEACETYLASE 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGTGGGGTGCAGGTCTCATCCGGCGACCCTGGTGGCAACCCGTGTCA
Internal bar code:AATGTTGTGCCTGAGGGCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1364
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGCTTCAGTGCGCTAGT
Suggested primer 2:GGATGGAAGTGGTGTGGGAG