Insertion junction: CLIP2.049945_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049945
Chromosome:chromosome 12
Location:4941216
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524400 (1 of 1) IPR003128//IPR007122//IPR029919 - Villin headpiece // Villin/Gelsolin // Protein flightless-1 CDS
Cre12.g524450 PTP3 Protein tyrosine phosphatase; (1 of 1) PF00102//PF00782 - Protein-tyrosine phosphatase (Y_phosphatase) // Dual specificity phosphatase, catalytic domain (DSPc) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCCTTCTTCTTGGCTTGCGCTTGCCTCCATGCCGGCTGCTTCTTGA
Internal bar code:TACAGCTAGAATTCAATTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2558
LEAP-Seq percent confirming:48.4848
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGAAGTTCTCAGTCACC
Suggested primer 2:CTGGCGCAGATATGTTTGCC