Insertion junction: CLIP2.049946_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049946
Chromosome:chromosome 17
Location:3828586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727300 NFO2 (1 of 3) 1.3.1.42 - 12-oxophytodienoate reductase; NADH:flavin oxidoreductase/NADH oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGACGTGATCGGCTTCACGGACTGGCCGCGGGTGGACCCCGCCACGA
Internal bar code:CAGTGCGATTTCTCTGTACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1023
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGTGCAAGCCTGTACGA
Suggested primer 2:AGTCGCGGTTGTGCTTAAGA