Insertion junction: CLIP2.049946_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049946
Chromosome:chromosome 17
Location:3828588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727300 NFO2 (1 of 3) 1.3.1.42 - 12-oxophytodienoate reductase; NADH:flavin oxidoreductase/NADH oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAGGGTCCTTGGCGTACCACACCTTGGCATCAAAGCCACCTGCACGG
Internal bar code:CAGTGCGATTTCTCTGTACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:703
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCGCGGTTGTGCTTAAGA
Suggested primer 2:AATGGTGCAAGCCTGTACGA