Insertion junction: CLIP2.049954_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049954
Chromosome:chromosome 6
Location:3480512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278110 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCACGGCAGCACGCAGCACAGGCGCTCAAGGCGCGCAGCGCCGGCCG
Internal bar code:CCTGATGTTGATCCTGCTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3139
LEAP-Seq percent confirming:97.8261
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAATCGATTGACGCGTT
Suggested primer 2:CGGCCTCTGTGTGTTCTTCT