Insertion junction: CLIP2.049954_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049954
Chromosome:chromosome 6
Location:3480525
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278110 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCTGTGGCCTTGACGGCGCGCCAGGAGTCCTCACTGGCCATGACGTT
Internal bar code:GGGTTTTATTCGTTGCAAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:376
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCTCTGTGTGTTCTTCT
Suggested primer 2:CAGCAATCGATTGACGCGTT