Insertion junction: CLIP2.049961_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049961
Chromosome:chromosome 17
Location:5476926
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739100 (1 of 1) K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGAGCGCCTCGTTGTAGCCCTGGCCCGGTCCGAGGTGGAAGCCGAAC
Internal bar code:GGGAGGAGGGACGGGCGCTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1599
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTAACCCGTTTTGCGTGC
Suggested primer 2:AGTACTACGCATCGAGCAGC