Insertion junction: CLIP2.049961_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049961
Chromosome:chromosome 17
Location:5477277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739100 (1 of 1) K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGATGGTGGAGGGAATGCCCTGCGGCAGGGCCGGGTCCTGCCGGGCTGG
Internal bar code:GGGAGGAGGGACGGGCGCTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:476
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACTACGCATCGAGCAGC
Suggested primer 2:AGTTAACCCGTTTTGCGTGC