Insertion junction: CLIP2.049969_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049969
Chromosome:chromosome 6
Location:1166031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258200 (1 of 1) PF00004//PF13771 - ATPase family associated with various cellular activities (AAA) (AAA) // PHD-like zinc-binding domain (zf-HC5HC2H) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGGGATTGCTGTGCGGTGGACTTGAAGTCACCAGGCTGGCATGCTAG
Internal bar code:TTCCCTGGACGTCTTATGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:334
LEAP-Seq percent confirming:73.0769
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGCGCGCTATGTTGAAG
Suggested primer 2:GAGAGGGTTTTCAGACGGCA