Insertion junction: CLIP2.049985_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049985
Chromosome:chromosome 9
Location:1098795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401750 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGGGGGGGGTGCAGGCCTTGGGAAGATGTGTCCGGTTTACTGTGGGC
Internal bar code:CAGAAAGCCCCCCACATAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3464
LEAP-Seq percent confirming:98.2456
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGAAGTGCTTTGTGTTG
Suggested primer 2:CGCATACAATGTCTGTGCGG