Insertion junction: CLIP2.049991_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049991
Chromosome:chromosome 3
Location:3804566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169850 TSC1 (1 of 1) PTHR10890:SF3 - CYSTEINE--TRNA LIGASE, CYTOPLASMIC; Cysteinyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCACTGTTTACCTTCTCGCATCTTGCCCCAGCAGCCACGTCTCAGGC
Internal bar code:TCTACGCAATGGGGAAAGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1190
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAAGAAGACAAGGGGACA
Suggested primer 2:CAGGTGCAAGTGAGTCGACT