Insertion junction: CLIP2.049998_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049998
Chromosome:chromosome 9
Location:3714121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397327 (1 of 1) PTHR11139:SF68 - DNA-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGCCGGGGCAGTAGCAGCCAGCGGGCCTCGCAGGCGGTAGCAGCAGC
Internal bar code:CCAAGTTTTCACCGGCTTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:807
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTAGGCAGGGTTCTGTG
Suggested primer 2:TTTGGACGACGAGATGGACG