Insertion junction: CLIP2.050001_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050001
Chromosome:chromosome 6
Location:4987636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281526 (1 of 1) IPR001660//IPR002048//IPR011011//IPR013761 - Sterile alpha motif domain // EF-hand domain // Zinc finger, FYVE/PHD-type // Sterile alpha motif/pointed domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGACACGTGCAAACACTCGTAACATCCGCCGGTGGTAGCCCCCTTA
Internal bar code:TCAGTATGAACGTCGGAGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1471
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCAACCCAGCCTACCAGG
Suggested primer 2:AGAGCAGGCTGACATGGAAC