Insertion junction: CLIP2.050005_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050005
Chromosome:chromosome 3
Location:6785789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196900 (1 of 1) PTHR10809:SF6 - AT11025P-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATCTAAGCGGCTCAGCGTGTGGCACAGCAGCGGCGACAAGAAGAGCG
Internal bar code:AGGTTGGGAACGCACTCTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1106
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCCGTGACCATTGTCCA
Suggested primer 2:TAAGCGCCATGTCTGCAGAA