Insertion junction: CLIP2.050006_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050006
Chromosome:chromosome 14
Location:1940501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g620500 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGTGGTTCGTGCCAGGTGGCGGTGGCGTGCCCAGTCGGAGCTGACAGG
Internal bar code:CAGTCGTTGTAAAGAGCATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1923
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTCGGTTGAAACGCAGC
Suggested primer 2:GTGCAAGCAATATCAGGGCG