Insertion junction: CLIP2.050012_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050012
Chromosome:chromosome 12
Location:3256583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499450 (1 of 2) IPR000626//IPR009060//IPR015940//IPR029071 - Ubiquitin domain // UBA-like // Ubiquitin-associated domain // Ubiquitin-related domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCGCGGCGCCGGCATTCCCGGCGCCTGGCCCCCGGGCACCTGCACA
Internal bar code:GGGTGCTGGATGCTTATTCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1674
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GATGACGACGACGACGATGA
Suggested primer 2:AGTCTGGCAATCATGACGCA