Insertion junction: CLIP2.050016_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050016
Chromosome:chromosome 2
Location:5151685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111800 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACCGCGCCGCGCCGCATGCAGTCCGCTCAGGGTGAGCAAATGCAGCTA
Internal bar code:TGACTGATCAATATGTTGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:930
LEAP-Seq percent confirming:28.125
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGAGAGAACCATGCACT
Suggested primer 2:TTCCAGGCAGAGTTCGTGTC