Insertion junction: CLIP2.050017_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050017
Chromosome:chromosome 3
Location:4451193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175550 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTGCTGCTGGTGCTGGTGGGCGGCAGGCGGCGGTGCAGGGTGGTGGC
Internal bar code:CTCGATAAAGAAAGTCTCACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:565
LEAP-Seq percent confirming:23.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAGTACCGGGTGACAAT
Suggested primer 2:CCGGGGAACTTGGTAGCAAT