Insertion junction: CLIP2.050025_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050025
Chromosome:chromosome 6
Location:2974205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273800 (1 of 1) PTHR23115//PTHR23115:SF180 - TRANSLATION FACTOR // GTP-BINDING PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCAGACAGGTCACCTGCAACAGCGCGCACAAGCCACGGGCAGGACAC
Internal bar code:CGTGGTCAGCTGCGTCATTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2078
LEAP-Seq percent confirming:62.2642
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGATAGCCTTGCCACACA
Suggested primer 2:TTGGTTCAGTTTGGGCTGGT