Insertion junction: CLIP2.050029_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050029
Chromosome:chromosome 17
Location:3613083
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725200 (1 of 2) K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCTGAAGTTGGCTTTCGGCCTCAGAGCCCTGACAAGCCTCGACGCATA
Internal bar code:CGTGGGGAATAGACCGCTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2289
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGCATTCGGATTCTCAC
Suggested primer 2:CAAGGGGTCAAGCTGCAAAC