Insertion junction: CLIP2.050032_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050032
Chromosome:chromosome 16
Location:3051722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664200 PDE33 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase CDS
Cre16.g664250 OASTL2,ASL2 O-acetylserine (Thiol)-lyase/cysteine synthase 2; (1 of 1) 4.2.1.22 - Cystathionine beta-synthase / Serine sulfhydrase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCTGTTTCGGGGCCGGCGATGAAAGGCCTCATCCATTCTCGGTCCCG
Internal bar code:TGGGGCGTCTCCTAAGGCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2431
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCACCACAAGCGGTAAG
Suggested primer 2:TATCGCACGTTGACACCACA