Insertion junction: CLIP2.050032_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050032
Chromosome:chromosome 16
Location:3051734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664200 PDE33 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase CDS
Cre16.g664250 OASTL2,ASL2 O-acetylserine (Thiol)-lyase/cysteine synthase 2; (1 of 1) 4.2.1.22 - Cystathionine beta-synthase / Serine sulfhydrase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAACAGGCTAGGCATCAAGTATTGGTTGAAGTTTGCCCAAGCGGAGGT
Internal bar code:TGGGGCGTCTCCTAAGGCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3238
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TATCGCACGTTGACACCACA
Suggested primer 2:AGGTCACCACAAGCGGTAAG