Insertion junction: CLIP2.050036_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050036
Chromosome:chromosome 17
Location:1737559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708500 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGGCACTGGCATGCGCAGCCATCTGGGCAGTGCCGGCCGCAGCGCAGC
Internal bar code:CGATATCAGATGGGCCATGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4610
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCCGGCCTCGAAAAAGC
Suggested primer 2:ATCCTTGAAAGCGGCATCCA