Insertion junction: CLIP2.050046_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050046
Chromosome:chromosome 16
Location:3093230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664650 intron
lncRNA_TCONS_00223190 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTGGACCCGACATCTTGACGCCCGCCCGCCTTCCCCTAGACCCCACAT
Internal bar code:GGCTATGTAGTTCAATCTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2805
LEAP-Seq percent confirming:20.8333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCCCAAACACAACATGA
Suggested primer 2:GTGTGTCGACCCGTTTACCT