Insertion junction: CLIP2.050052_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050052
Chromosome:chromosome 11
Location:326473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801229 (1 of 7) IPR011335 - Restriction endonuclease type II-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGGGCAGCAGGTAGTGGGGGTGGCTTCGTGTTGGGCGGGATGACGCC
Internal bar code:TGCCTAGGCTGTCAACTGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3240
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATCACGGTGGTGGACAA
Suggested primer 2:ACGGAAAGCGGCTTTTGAAC