Insertion junction: CLIP2.050060_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050060
Chromosome:chromosome 15
Location:452635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635750 (1 of 1) IPR003613//IPR016024 - U box domain // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAACATTGTTCCATGGGTTCGAGTTCATGTGGCCCGACTAACTCTTTT
Internal bar code:GATAAGACTAGGACATTGCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:372
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTATGGTTAGCGGGTTT
Suggested primer 2:CGTCTGCCACTTCCTCAACT