Insertion junction: CLIP2.050071_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050071
Chromosome:chromosome 16
Location:5364842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683400 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAAGTCAAAGGGCAGGAAGCGGATCTTCTTGTAGGTCTTGGGGTCCA
Internal bar code:AACCCGGTCTTGTCCCATGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:843
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GATCTGGGTGTGCGACTTCA
Suggested primer 2:GCGCTTATGTCCTCTCCCTC