Insertion junction: CLIP2.050071_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050071
Chromosome:chromosome 16
Location:5364849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683400 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAAGGCCGGCGGTGGCAAGGGCTCGCTGCTCAAGGCGGAGATGGAGC
Internal bar code:AACCCGGTCTTGTCCCATGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2477
LEAP-Seq percent confirming:38.9381
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:69
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTTATGTCCTCTCCCTC
Suggested primer 2:GATCTGGGTGTGCGACTTCA