Insertion junction: CLIP2.050073_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050073
Chromosome:chromosome 1
Location:8152548
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g068377 (1 of 1) K14771 - U3 small nucleolar RNA-associated protein 19 (NOC4, UTP19) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATAGGGCGGGGGTGGGGGTGGCGGGGTCGCCACAGCAGGCAACGGTTG
Internal bar code:ACATATTTTGCCACGTAACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:354
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCCCATTCCCTTTCCAA
Suggested primer 2:TGACCGCCTTTTCGTCATGA