Insertion junction: CLIP2.050076_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050076
Chromosome:chromosome 9
Location:2657825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801020 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCGCGACACCCGCAGCTGCTGCAGCAGCAGCTGGCCTAGCTGCAAT
Internal bar code:CTCACGTCTAAAATTTGTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2059
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGATCAAGACGACGCAACAC
Suggested primer 2:TTTCGAAGCAGGCGTTTGTG