Insertion junction: CLIP2.050076_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050076
Chromosome:chromosome 9
Location:2657825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801020 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCTCAAGGTTCGGCCCAAGCGCGTGCGCCCGCACAGGTGCGTGCCC
Internal bar code:AGGCAAGCGCCGCCGAGCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1250
LEAP-Seq percent confirming:75.6757
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCGAAGCAGGCGTTTGTG
Suggested primer 2:CGATCAAGACGACGCAACAC