Insertion junction: CLIP2.050081_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050081
Chromosome:chromosome 1
Location:3782353
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g024650 CTL1 carbohydrate-binding protein; (1 of 2) PF00059//PF07714//PF14295 - Lectin C-type domain (Lectin_C) // Protein tyrosine kinase (Pkinase_Tyr) // PAN domain (PAN_4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATACAGTCGCAACTATGTATGTGGGTTGCGTGAGTCCAATATGGGCG
Internal bar code:GGTCACCTATACCAGTCCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTCGCCAAATTATGCCG
Suggested primer 2:TCAACCGTATGTGGTCGCAA