Insertion junction: CLIP2.050083_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050083
Chromosome:chromosome 6
Location:2388270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268450 (1 of 1) PTHR22850//PTHR22850:SF85 - WD40 REPEAT FAMILY // WD-40 REPEAT-CONTAINING PROTEIN MSI4-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAATTAGCGCTCGCCAAGTTCTTGCGAGCTTGAGTGGCTCGCTGTTTA
Internal bar code:GTGATGCTCCGCGTGAGTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1559
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGATGCCAACACCTGCAC
Suggested primer 2:TTGGCTCTCTCACACGACAC