Insertion junction: CLIP2.050089_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050089
Chromosome:chromosome 10
Location:4444842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g450650 (1 of 34) PF00168 - C2 domain (C2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTATCGGCTGTTGCTCTCCTGCTGGGCGAGGGTGCTCGAGGCGGGGC
Internal bar code:CCCATGGATCTGTGGGATCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1791
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGACCAGGGCAACGTCAC
Suggested primer 2:GGTCGGGTCAGTTGATGTGA