Insertion junction: CLIP2.050106_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050106
Chromosome:chromosome 2
Location:4918066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110050 (1 of 1) PTHR22844:SF160 - WD40 REPEAT-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCGCTAATCCGCTAGACGTGTTTCCTTGCTAACACCCACAGGCCGGAC
Internal bar code:GCCGTGAACGTATTAGGATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:989
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAAACACGCGTCAACAG
Suggested primer 2:CCTTGCCGTGTTTGGTTGAG