Insertion junction: CLIP2.050108_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050108
Chromosome:chromosome 6
Location:3948686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278198 (1 of 1) 1.14.11.33//4.2.99.18 - DNA oxidative demethylase / Alkylated DNA repair protein // DNA-(apurinic or apyrimidinic site) lyase / Phage-T4 UV endonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCACGCCGACACCCGAGGCACTCCTTTGTGGCGCAGGAACGGGAAGCT
Internal bar code:AATGCGGGCACGTCCGTAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:284
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGAAGGGATCAGGGAGA
Suggested primer 2:GGGGCCTGACACCAATAACA