Insertion junction: CLIP2.050109_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050109
Chromosome:chromosome 16
Location:4723859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g688350 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACAGGCGGTGGAGCTGGCGGCCGCCCTGCCGAAGTGCGGCCCTCTGGG
Internal bar code:ACCATTTTTGATGGATTGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:190
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCTCCACCTTCACTTCC
Suggested primer 2:ATGGGGCTGCTAGGTGTAGA