Insertion junction: CLIP2.050110_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050110
Chromosome:chromosome 6
Location:4973640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281400 NAH1 Cation antiporter; (1 of 11) PF00999 - Sodium/hydrogen exchanger family (Na_H_Exchanger) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTGCTGAGACGCTGCTGCCGGGCCGGCTGCGCGACCTCATGTCCGCC
Internal bar code:AGAGGAGGTTACAGAACCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4264
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACATGTGTGTGCAAGCG
Suggested primer 2:ATCTTCCCTCCCTGTCCCTC