Insertion junction: CLIP2.050111_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050111
Chromosome:chromosome 16
Location:3599908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671685 (1 of 5) 2.3.1.24 - Sphingosine N-acyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATGGCGGATGTGGACAGGTACCGCTAACCGAACATGCGCGGGATCGT
Internal bar code:AGGGTACGCTGCGGTAAAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3410
LEAP-Seq percent confirming:53.125
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:128

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTGGCTGTTGCATTTGC
Suggested primer 2:GGGGCTGGAGTCTGGTAGTA