Insertion junction: CLIP2.050112_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050112
Chromosome:chromosome 13
Location:3643021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588100 CYN19C,ROC2,CYN5,CYN19-3 (1 of 1) K09565 - peptidyl-prolyl isomerase F (cyclophilin D) (PPIF); Cyclophilin 19-3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTAAGGTAGGCCCAGCAGCCAGGTGGGGCCGACTCAGCCGCGAGCCG
Internal bar code:CCGGTTGAATTGTGATAAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1160
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGAGTTCGGGGGAATATG
Suggested primer 2:TAGGTCCCTCTACCCAACGG