Insertion junction: CLIP2.050114_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050114
Chromosome:chromosome 3
Location:8885505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205585 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCGACCCCCCCCCCCTTCACTCTCTGTGCCAGCGGTCCGATCTGCGA
Internal bar code:GGGACTACTTTAGTGAAAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2370
LEAP-Seq percent confirming:14.6341
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCACCTCGCAAAGACCAT
Suggested primer 2:ACAAGGCAGAGGCAGATGAC