Insertion junction: CLIP2.050116_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050116
Chromosome:chromosome 9
Location:5770237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410950 NIA1,NIT1 Nitrate reductase; (1 of 1) 1.6.2.2//1.7.1.1 - Cytochrome-b5 reductase // Nitrate reductase (NADH) / Nitrate reductase (NADH(2)) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCCAGGGTGGTTCAGGGTTTCGTGTGCACGTCAGCACGGGTTGGGGT
Internal bar code:AATGGAGTCGAAAGAGATTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2118
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCCCATCCCACTAAAC
Suggested primer 2:TTGCTGGTTTTGATGCCACG